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UID:536@fds.yale.edu
DTSTART;TZID=America/New_York:20231130T160000
DTEND;TZID=America/New_York:20231130T170000
DTSTAMP:20250916T142128Z
URL:https://fds.yale.edu/events/data-science-project-match/
SUMMARY:Data Science Project Match
DESCRIPTION:Remote access available to Yale-only.\n\n\nProject Presenters:\
 n\n\n\nJonathan Reuning-SchererSenior Lecturer in StatisticsYale Dept of S
 tatistics / School of the EnvironmentJonathan.reuning-scherer@yale.edu |
  https://environment.yale.edu/profile/ruening-schererDramatists Guild Mem
 bership Survey AnalysisDuring spring of 2023\, the largest ever survey was
  conducted of the membership of the Dramatists Guild of America.  The re
 sulting database contains demographic\, compensation\, attitudinal\, and c
 areer history for 2000 respondents.  In addition\, data was collected on
  the details surrounding the creation of 1000 creative works including maj
 or Broadway shows.  There is the opportunity for 2-3 students to complet
 e senior projects/graduate practical work during the spring of 2024 workin
 g with DG leadership and Jonathan Reuning-Scherer.  Results will likely 
 be published in DG materials around the 2024 Tony Awards.\n\n\n\nMark Gers
 tein Albert L Williams Professor of Biomedical Informatics Professor of 
 Molecular Biophysics & Biochemistry\, of Computer Science\, and of Statist
 ics & Data Science Project presented by Joel RozowskyResearch Scientist i
 n Molecular Biophysics and Biochemistry\, Gerstein Labmark@gersteinlab.org
 \, joel.rozowsky@yale.edu | http://gersteinlab.orgGenomics & Bioinforma
 tics Research in the Gerstein Lab\n\n\n\nThe Gerstein lab conducts bioinfo
 rmatics research in the biomedical and genomic fields. We use various data
  computational data analytics methods including machine learning technique
 s to analyze large biomedical datasets. The lab is particularly focused on
  the following areas of research: genomic privacy\, personal genomes\, gen
 ome annotation and neurogenomics.\n\n\n\nKim R. M. Blenman\, Ph.D.\, M.S.A
 ssistant ProfessorDepartment of Internal Medicine\, Section of Medical Onc
 ology\, School of MedicineDepartment of Computer Science\, School of Engin
 eering and Applied ScienceYale Cancer Centerkim.blenman@yale.edu | Profile
 : https://medicine.yale.edu/profile/kim_blenman/Research: https://blenma
 ninnovationgroup.org/Statistical Analysis and Data Visualization for Predi
 ctive and Prognostic Tools for ProteomicsStatistical analysis and data vis
 ualization for predictive and prognostic tools are the cornerstones of omi
 cs analysis in medicine. Although we have progressed through the age of ge
 nomics\, as a field we are also now moving into the age of proteomics. The
  biology assays that generate the data for genomics and proteomics are not
  the same. Therefore\, new statistical analysis tools are required for thi
 s new proteomics revolution. Students who are interested in being part of 
 this revolution are welcome to join my research group. There are many proj
 ects available.\n\n\n\nLeandros TassiulasJohn C. Malone Professor of Elect
 rical Engineering & Computer ScienceProject Presented by Georgios Palaiokr
 assasPostdoctoral Associate\, Electrical Engineering\, Tassiulas Lableandr
 os.tassiulas@yale.edu\, georgios.palaiokrassas@yale.edu | https://seas.
 yale.edu/faculty-research/faculty-directory/leandros-tassiulas\n\n\n\nBloc
 kchain Analytics: A Machine Learning Approach\n\n\n\nThe inception of perm
 issionless blockchains with Bitcoin in 2008\, was followed by the developm
 ent of Ethereum and other blockchain platforms\, offering new solutions by
  enabling smart contracts’ implementation and execution. This project em
 phasizes into applying machine learning techniques including statistical m
 ethods\, GNNs and LLMs to an extensive transaction dataset spanning multip
 le blockchain platforms. The project aims to uncover patterns\, trends\, a
 nd anomalies within the blockchain transactions for use cases such as iden
 tifying fraudulent activities\, predicting cryptocurrency price fluctuatio
 ns\, and understanding the network's growth dynamics. Another direction is
  the combination of data processing\, feature engineering and application 
 of Machine Learning to estimate the risk of transactions\, assess the cred
 it scoring of users and recommend strategies to mitigate risk.\n\n\n\nWe a
 re looking for students who have background in applied machine learning. A
 ny experience in the areas of Blockchain and Decentralized Finance are a p
 lus!\n\n\n\nJun Deng\, PhD\, DABR\, FAAPM\, FASTROProfessor of Therapeutic
  Radiology\; Director of Physics Research\, Therapeutic Radiology\; Associ
 ate Director of Medical Physics Residency Program\, Therapeutic Radiologyj
 un.deng@yale.edu | Profile: https://medicine.yale.edu/profile/jun-deng/
  Research: https://medicine.yale.edu/lab/deng/Enabling Digital Twins for
  Predictive OncologyThe human body is a complex\, multiscale\, dynamical s
 ystem with constant interactions within itself and with the environment. M
 any new technologies have been used for health profiling\, such as functio
 nal and molecular imaging\, liquid biopsies\, digital pathology\, genomic 
 profiling\, fitness trackers and wearables\, and implantable sensors. Whil
 e each of these technologies sheds light on one's health state\, these mul
 timodal datasets are scattered and disconnected\, not amenable to AI/ML an
 alysis at scale.Predictive oncology is to anticipate likely patient outcom
 es and health status based on multimodal data by modeling the dynamics and
  trajectory for individual cancer patient. One of the promising technologi
 es to explore predictive oncology is by creating digital twins of cancer p
 atients. A person's digital twin may aid in monitoring health status\, sim
 ulating patient outcome trajectories\, developing tailored therapeutic str
 ategies\, preventing adverse effects\, and improving lifestyle. In this pr
 oject\, we aim to develop novel AI/ML algorithms by modeling existing clin
 ical\, imaging\, and radiotherapy datasets to enable cancer patient digita
 l twins in radiation oncology.We are looking for students to join our lab 
 and help enable digital twins for predictive oncology via statistical\, co
 mputational\, mathematical\, and mechanistic modeling of spatiotemporal pa
 tient data.\n\n\n\nVictor S. Batista\, FRSCJohn Gamble Kirkwood Professor 
 of ChemistryYale Quantum Institute & Yale Energy Sciences InstituteACS Ass
 ociate Editor\, JCTCvictor.batista@yale.edu | http://ursula.chem.yale.ed
 u/~batista/\n\n\n\nQuantum and Classical Machine Learning Models for Molec
 ular Design\n\n\n\nThe incredible capabilities of generative machine learn
 ing models and recent advances in quantum computing have the potential to 
 revolutionize the field of molecular design and drug discovery. My group i
 s working on the development and implementation of generative algorithms f
 or design of drugs and retrosynthetic pathways. We are currently working o
 n state-of-the-art transformers\, quantum convolutional neural networks\, 
 and quantum variational autoencoders for de novo molecular design\, and 
 development of a cloud server interface to make our methods available to e
 xternal users from pharmaceutical companies. \n\n\n\nDavid van Dijk\, Ph.
 D.Assistant Professor of Medicine\, Yale School of MedicineAssistant Profe
 ssor of Computer Science Project presented by Daniel LevinePostdoctoral A
 ssociatedavid.vandijk@yale.edu | vandijklab.org“Using Machine Learning
  to understand the language of biology”Recent advances in large language
  models provide new opportunities for decoding biology. Single-cell omics 
 data encodes complex cellular behaviors and processes into high-dimensiona
 l molecular profiles. By treating these data as textual representations\, 
 we can apply and fine-tune neural language models to uncover the underlyin
 g grammatical rules governing biological systems. We have demonstrated tha
 t these models can learn to translate between species\, matching cell type
 s and gene expression programs between mice and humans in a completely uns
 upervised fashion. This cross-species translation highlights how fundament
 al aspects of biology form a universal language translatable across organi
 sms. More broadly\, interpreting single cell data as “biological text”
  enables leveraging powerful natural language processing approaches to fin
 d patterns\, generate hypotheses\, and gain conceptual understanding of bi
 ology.\n\n\n\nRohan Khera\, MD\, MSDirector\, Cardiovascular Data Science 
 (CarDS) LabAssistant Professor\, Cardiovascular Medicine\, Yale School of 
 MedicinePresented by Lovedeep Dhingra and Arya AminorroayaPostdoctoral Ass
 ociatesrohan.khera@yale.edu | CarDS-Lab.org\n\n\n\n"Innovating Cardiovas
 cular Care with Multimodality Data Science"The Cardiovascular Data Science
  (CarDS) Lab at Yale leverages advances in deep learning and AI to enhance
  and automate care. The work uses numerous data streams in the electronic 
 health record and focuses on natural language processing\, federated learn
 ing\, signal processing\, and computer vision for enhanced inference\, and
  develops and deploys novel convolutional neural networks and transformer 
 models to address care challenges. The experience is ideal for students in
 terested in health tech and/or medicine and looking to gain from a longitu
 dinal research experience.\n\n\n\nEduardo Fernandez-DuqueProfessor of Anth
 ropology. School of the Environmenteduardo.fernandez-duque@yale.edu | ht
 tps://www.eduardofernandez-duque.comQuerying a Social Evolution Research V
 ideo Database for Research and TeachingEduardo Fernandez-Duque (Anthropolo
 gy and School of the Environment) has been co-organizing the international
  remote Frontiers in Social Evolution Seminar Series (FINE website).  Res
 earchers from > 20 countries and all continents have given 125 one-hour ta
 lks on their "social evolution" research followed by a 1-hour Q&A session.
   All weekly seminars were recorded live and made publicly available in t
 he FINE YouTube channel (FINE YouTube Channel).Data set: 2\,500 hours of v
 ideos on social evolution research and follow-up discussions.Specific poss
 ible objectives:1- to develop searching tools to query the video collectio
 n and to extract "material" (e.g. graphs\, tables\, images) from the video
 s2- to produce series of short video clips illustrating topics that cut ac
 ross many of the talks.\n\n\nReza YaesoubiAssociate Professor of Public He
 althAssociate Professor\, Institution for Social and Policy Studiesreza.ya
 esoubi@yale.edu | https://ysph.yale.edu/profile/reza-yaesoubi/ Generatin
 g and evaluating simple classification rules to predict local surges in CO
 VID-19 hospitalizationsLow rates of vaccination\, emergence of novel varia
 nts of SARS-CoV-2\, and increasing transmission relating to seasonal chang
 es and relaxation of mitigation measures leave many US communities at risk
  for surges of COVID-19 that might strain hospital capacity. The trajector
 ies of COVID-19 hospitalizations differ across communities\, but existing 
 predictive models of COVID-19 hospitalizations are almost exclusively focu
 sed on state-level predictions. We are interested to develop and evaluate 
 methods to generate simple\, interpretable classification rules to predict
  whether COVID-19 hospitalization will exceed the local hospitalization ca
 pacity in the short term.\n\n\nElena GrewalLecturer\, Yale School of the E
 nvironmentelena.grewal@yale.edu | Informing policy decisions to increase
  affordable housingNew Haven has an affordable housing crisis. The number
  of homeless students has doubled in the past year. Residents cannot affo
 rd to stay in their homes because of rent increases and a general shortage
  of affordable housing. While there are new apartments being built\, many 
 are high-end and not something that people who are being pushed out of the
 ir homes can afford. A policy to allow homeowners to make attics/basements
  and attached buildings to their own homes into rental units (ADUs) result
 ed in no additional housing being built.  It would be helpful to have d
 ata on the current housing stock and rental market to inform policy makers
  decisions.  The Fair Rent Commission is tasked with reviewing rent incr
 eases and also reducing rents when tenants live in poor conditions (exampl
 e here). Recently the commission has seen cases of parents with children 
 and elderly on fixed income who do not have other options. There is a staf
 f member who is tasked with knocking on doors to raise awareness of the co
 mmission and also to inspect housing conditions. It would be helpful to us
 e data to target their efforts. In addition the commission is supposed to 
 use the availability of other housing as a factor in decisions and there i
 s no database available for this. The Fair Rent Commission can also make h
 ousing policy recommendations. \n
CATEGORIES:FDS Events,Project Match
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